Lettuce SFP Chip Project



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Search by Probe Type
TI (tiling)
Enter Probesets
Please enter CLS_S3 contig identifiers
(e.g. 'CLS_S3_Contig1006').
Multiple entries on separate lines
Limited to 25 probesets.


Select Probeset Assembly
Original
Native-Alien
EX (expression)
Select Probeset(s)
TR (technical replicate)
Select Gene(s)
Select Probe(s)
Select Replicate(s)
AF (Affymetrix bacterial controls)
Select Probeset(s)
Select PM/MM PM
MM
QC (Affymetrix grid B2 oligo)
Select Class(es)
AG (Affymetrix AntiGenomic)
Select GC content (out of 25)


Search by Bioconductor ID
Enter a valid Bioconductor index number for the lettuce chip
BioCIndex  


Search by X and Y coordinates
Enter valid X and Y coordinates for the lettuce chip
X:  
Y:  


Output Options (only relevant for 'Search by Probe Type - TI probes')

BioCIndex  
X  
Y  
ProbesetID  
Origin  
TargetStrandedness  
ProbeSequence  
GC  
DeltaG  
Score  




Contact information
Send Email to Hamid Ashrafi
Authors: Hans van Leeuwen, Hamid Ashrafi, Sebastian Reyes Chin-Wo


Last modified: February 06, 2016. 15:08:46 pm PST